Getting Started

Quickstart FaceBase Data Philosophy

Using FaceBase

Key Concepts for FaceBase Users Browsing and Filtering Data Visualizations in FaceBase Data Sharing and Citing Data Exporting Data from FaceBase Accessing Data Programmatically Using 3D Viewers Viewing NIfTI files Converting TIFF to OME-TIFF (using Bio Formats)

Controlled Access Human Data

Controlled Access Human Data - Policy and Requests A. Read and complete the Data Use Certificate Agreement (DUC) B. Complete the online Data Access Request (DAR) form (An IRB is required) C. Select the Requested Datasets D. Print, Gather Signatures and Submit the DUC and DAR forms E. Receive notification and further instructions F. Create and upload your encryption keys G. Renew access

Submitting Data - Basics

Video Tutorials for Contributors Key Concepts for Data Contributors Data Submission Process Creating a Dataset Creating Experiments, Biosamples, and Replicates Uploading Data Files Quality Control Rules Releasing Your Dataset Self-guided Tutorial

Submitting Data - Advanced

Using the Annotations Editor (2D images) Defining Surface Models (3D models) Linking Thumbnails to Files

Tools

DERIVA Tools - Bulk upload and export

Support

Getting Help FAQs

E. Receive notification and further instructions

Once your request is processed and reviewed, you will be notified via email whether or not your request is approved.

Allow approximately 4-6 weeks for a response. If approved, you will have access to the human data for one year after the approval date.{: .bg-info}

If you receive an approval email, a member of the FaceBase Hub will contact you directly to provide the data securely (i.e., you will not download the data directly from the regular website.) The process will use encryption as described on the next page.

If you have any questions regarding this process or need help with downloads please contact the FaceBase Help Desk via email: help AT facebase.org.